Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015789563.1_cds_XP_016497054.1_1053
CDS Infomation

[gene=LOC107815875] [db_xref=GeneID:107815875] [protein=pentatricopeptide repeat-containing protein At1g07590, mitochondrial-like isoform X4] [protein_id=XP_016497054.1] [location=complement(8889..10136)] [gbkey=CDS]
Sequence

ATGGAATGGGTTATAAGGGAAAGACCTTACAGACCAAAGGAACTAGATTACTCATATTTA
CTAGAATTCACTTCTAAGCTTCATGGGATATCACAAGCTGAAAGCCTTTTCTCACGAATA
CCATCTGAGTTCCAAAATGAGTTGCTTTACAACAATCTTATACTCGGATGCTTGAACAGA
GGCCTAATAAGGCTTTCACTAGCATATATGAAGAAAATGAGAGAGCTGGGTCATCCCATA
TCTTATTTGGTGTTCAACCATCTCATTATTCTCCACTCCTCCCCAAGCCGCAAGAAGTCC
ATACCTAAAATCCTGACGCAGATGAAAGCCGATAAGGTCATTCCACATGTTTCGACCTTT
AATATTCTGCTCAAGATAGAAGCAAATGAACACAATATTGAACGCCTGTTAAAAGTATTT
GGTGACATGAAGAGAGCAGAAGTTGAACCGAATGAGGTATCATACTGCATATTGGCCACT
GCACATGCTGTGGCTAGGTTGTATACAGTTTGTGAGACCTATGTTGAAGCTCTTGAGAAG
TCTGCAACTGGACGAAACTGGTCTACATTGGACATTCTTATCATACTTTATGGGTATTTG
GGGAAGCGGAATGATTTGGAGAGAATATGGGGCATCATTATGGAGCTGTCCCATGTTAGG
TCTAAGAGTTATGTCCTGGCGATCGAAGCATTTGGTAGGATCGGAGATATCTGTCGTGCT
GAAGAGCTATGGTCCGAAATGAAATCAAGGAATTCTTTGAAGTCAAATGAGCAGTTCAAT
TCCTTGATAGCTGTATACTGCAGATATGGACTTATCACCAAAGCCACTGCATTGTATAAG
GAGATGGAGAAAAGTGGGTGCAAGCCAAATGCCATTACTTATCGGCATCTTGCTCTTGGT
TGCTTGAGAGCGGGGTTAATTAAGGAGGCTATTAAAACTCTTCAATTGGGGATGGATATG
GCAGCAAGCATAAAGGTGAAAAGATCAACTCCATGGTTGGAGACTACTCTTTCAATAATC
GATATATTTGCAGATAATGGTGATGTAGAGAATGCTGAAAAGTTGTTTGAAGAACTGAAG
AAAGCAAATTATACTAGGTATACTTTTGTGTACAATACGTTAATTAAGGCGTATGTTAAG
GGGAAGGTATATGATCCAAATCTGCTTAAAAGAATGATTCTTGGAGGGGCGAGGCCAGAT
TCTGAAACCTATAGCCTTTTGAAAGTTGTTGACCAATTTCGGACGTGA

Peptide Sequence

PEP ID

XP_016497054.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g07590, mitochondrial-like isoform X4 [Nicotiana tabacum]
Sequence

MEWVIRERPYRPKELDYSYLLEFTSKLHGISQAESLFSRIPSEFQNELLYNNLILGCLNR
GLIRLSLAYMKKMRELGHPISYLVFNHLIILHSSPSRKKSIPKILTQMKADKVIPHVSTF
NILLKIEANEHNIERLLKVFGDMKRAEVEPNEVSYCILATAHAVARLYTVCETYVEALEK
SATGRNWSTLDILIILYGYLGKRNDLERIWGIIMELSHVRSKSYVLAIEAFGRIGDICRA
EELWSEMKSRNSLKSNEQFNSLIAVYCRYGLITKATALYKEMEKSGCKPNAITYRHLALG
CLRAGLIKEAIKTLQLGMDMAASIKVKRSTPWLETTLSIIDIFADNGDVENAEKLFEELK
KANYTRYTFVYNTLIKAYVKGKVYDPNLLKRMILGGARPDSETYSLLKVVDQFRT

Transcript Sequence

Gene sequence data has not been registered.